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Cluster: HRGMv2_3781_CGC53

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3781_54 HRGMv2_3781_54_13 11064 13256 - 3.A.7.16.1
pfam HRGMv2_3781_54 HRGMv2_3781_54_14 13253 15259 - PMT | PMT_2
CAZyme HRGMv2_3781_54 HRGMv2_3781_54_15 15497 17899 + GH38
TF HRGMv2_3781_54 HRGMv2_3781_54_16 17901 18773 + HTH_AraC
TC HRGMv2_3781_54 HRGMv2_3781_54_17 18706 19902 - 2.A.103.1.2
pfam HRGMv2_3781_54 HRGMv2_3781_54_18 19979 21247 - Adenylsucc_synt
pfam HRGMv2_3781_54 HRGMv2_3781_54_19 21503 22780 + Aldedh
TC HRGMv2_3781_54 HRGMv2_3781_54_20 22803 24590 + 3.A.2.3.3
Gene ID: HRGMv2_3781_54_13
Type: TC
Location: 11064 - 13256 (-)
Gene ID: HRGMv2_3781_54_14
Type: pfam
Location: 13253 - 15259 (-)
Gene ID: HRGMv2_3781_54_15
Type: CAZyme
Location: 15497 - 17899 (+)
Gene ID: HRGMv2_3781_54_16
Type: TF
Location: 17901 - 18773 (+)
Gene ID: HRGMv2_3781_54_17
Type: TC
Location: 18706 - 19902 (-)
Gene ID: HRGMv2_3781_54_18
Type: pfam
Location: 19979 - 21247 (-)
Gene ID: HRGMv2_3781_54_19
Type: pfam
Location: 21503 - 22780 (+)
Gene ID: HRGMv2_3781_54_20
Type: TC
Location: 22803 - 24590 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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