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Cluster: HRGMv2_3781_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3781_4 HRGMv2_3781_4_103 129652 131787 + GH50
CAZyme HRGMv2_3781_4 HRGMv2_3781_4_104 131784 133772 + GH50 | GH50
pfam HRGMv2_3781_4 HRGMv2_3781_4_105 133857 134459 - Lysine_decarbox | LDcluster4
TC HRGMv2_3781_4 HRGMv2_3781_4_106 134812 136236 + 3.A.15.3.1
pfam HRGMv2_3781_4 HRGMv2_3781_4_107 136233 137759 + HlyD_3 | HlyD_D23
TC HRGMv2_3781_4 HRGMv2_3781_4_108 137756 138478 + 3.A.1.122.2
TC HRGMv2_3781_4 HRGMv2_3781_4_109 138475 139746 + 3.A.1.122.2
Gene ID: HRGMv2_3781_4_103
Type: CAZyme
Location: 129652 - 131787 (+)
Gene ID: HRGMv2_3781_4_104
Type: CAZyme
Location: 131784 - 133772 (+)
Gene ID: HRGMv2_3781_4_105
Type: pfam
Location: 133857 - 134459 (-)
Gene ID: HRGMv2_3781_4_106
Type: TC
Location: 134812 - 136236 (+)
Gene ID: HRGMv2_3781_4_107
Type: pfam
Location: 136233 - 137759 (+)
Gene ID: HRGMv2_3781_4_108
Type: TC
Location: 137756 - 138478 (+)
Gene ID: HRGMv2_3781_4_109
Type: TC
Location: 138475 - 139746 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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