Cluster: HRGMv2_3781_CGC59
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3781
- CGC Family ID: CGCFAM_02046
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3781_86 | HRGMv2_3781_86_1 | 28 | 483 | + | 3.A.2.3.3 |
| TF | HRGMv2_3781_86 | HRGMv2_3781_86_2 | 648 | 1481 | - | HTH_AraC |
| CAZyme | HRGMv2_3781_86 | HRGMv2_3781_86_3 | 1659 | 4979 | + | GH148 |
| pfam | HRGMv2_3781_86 | HRGMv2_3781_86_4 | 5103 | 5849 | + | N_methyl |
| CAZyme | HRGMv2_3781_86 | HRGMv2_3781_86_5 | 5865 | 8009 | + | GH39 |
Gene ID: HRGMv2_3781_86_1
Type: TC
Location: 28 - 483 (+)
Type: TC
Location: 28 - 483 (+)
Gene ID: HRGMv2_3781_86_2
Type: TF
Location: 648 - 1481 (-)
Type: TF
Location: 648 - 1481 (-)
Gene ID: HRGMv2_3781_86_3
Type: CAZyme
Location: 1659 - 4979 (+)
Type: CAZyme
Location: 1659 - 4979 (+)
Gene ID: HRGMv2_3781_86_4
Type: pfam
Location: 5103 - 5849 (+)
Type: pfam
Location: 5103 - 5849 (+)
Gene ID: HRGMv2_3781_86_5
Type: CAZyme
Location: 5865 - 8009 (+)
Type: CAZyme
Location: 5865 - 8009 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Lentisphaeria
Order
Victivallales
Family
Victivallaceae
Genus
Victivallis
Species
Victivallis sp900550905
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.