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Cluster: HRGMv2_3781_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3781_26 HRGMv2_3781_26_13 18768 19847 + PL38
NULL(UNKNOWN) HRGMv2_3781_26 HRGMv2_3781_26_14 19944 21218 + NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_3781_26 HRGMv2_3781_26_15 21325 22389 + GntR
CAZyme HRGMv2_3781_26 HRGMv2_3781_26_16 22507 26025 + GH39
pfam HRGMv2_3781_26 HRGMv2_3781_26_17 26079 26834 + N_methyl
CAZyme HRGMv2_3781_26 HRGMv2_3781_26_18 27033 28112 + PL38
pfam HRGMv2_3781_26 HRGMv2_3781_26_19 28125 29297 - GlcNAc_2-epim
TC HRGMv2_3781_26 HRGMv2_3781_26_20 29361 30152 - 3.A.1.15.8
Gene ID: HRGMv2_3781_26_13
Type: CAZyme
Location: 18768 - 19847 (+)
Gene ID: HRGMv2_3781_26_14
Type:
Location: 19944 - 21218 (+)
Gene ID: HRGMv2_3781_26_15
Type: TF
Location: 21325 - 22389 (+)
Gene ID: HRGMv2_3781_26_16
Type: CAZyme
Location: 22507 - 26025 (+)
Gene ID: HRGMv2_3781_26_17
Type: pfam
Location: 26079 - 26834 (+)
Gene ID: HRGMv2_3781_26_18
Type: CAZyme
Location: 27033 - 28112 (+)
Gene ID: HRGMv2_3781_26_19
Type: pfam
Location: 28125 - 29297 (-)
Gene ID: HRGMv2_3781_26_20
Type: TC
Location: 29361 - 30152 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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