dbCAN Logo

PROTEIN: HRGMv2_3781_26_14

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
HRGMv2_3781_26_14.pdb
Genome ID:
HRGMv2_3781
Protein ID:
HRGMv2_3781_26_14

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MDPDRFSRNF   PRYALYDSEV   PIWCLTPHKG   NVIHRFFDTS   PLSPSGKFVA   LLRLPDREEF 60
PRPGDRAEVV   LIDTETGEER   VVWETAGWEY   QLGANINWGA   DDSQLLFNDV   DTATWTPFAV 120
VLDPISGASR   KLERCVYHVS   PDGRYALSAD   LRAMRRTQWG   YGVMVPDQLV   PEHFGPSPDD 180
GVYLTDIATG   KSRLLISARE   AVERTMTAER   RREYEASEVY   NFHTKWSPDG   TRLMFSLRFY 240
PKTGGMFDAM   SKLWRALRFD   VFTIRPDGSE   LYNAIPASEW   DKGGHHTNWT   RDSRGLTMNL 300
GIYRQGLRFC   QCGYDGSNLR   PIGEFTGSGH   PSFHHNGRWG   ITDCYIQECF   TAPDRSIPIR 360
LIDLETNTER   ALTRVDITTP   GLAKSYNFRL   DPHPVWCDND   NFLIFNAMEN   GARRVFLADM 420
RKFQ 424
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A0H3GXZ1-F1-model_v4 8 424 9 386 0.7324 0.8041
AF-P31455-F1-model_v4 10 424 1 415 0.6759 0.7005
AF-Q329C4-F1-model_v4 10 423 1 414 0.6718 0.6974
AF-A0A0H3H4U5-F1-model_v4 22 424 1 406 0.67 0.7056
AF-A0A077Z3Y8-F1-model_v4 17 424 8 416 0.6659 0.7014
AF-O18640-F1-model_v4 18 423 3 316 0.6606 0.7799
AF-G4VK78-F1-model_v4 17 422 14 319 0.6536 0.7944
AF-A0A5S6PYE4-F1-model_v4 1 422 6 329 0.6534 0.7685
AF-A0A1C1CTZ8-F1-model_v4 17 424 19 347 0.653 0.7706
AF-A0A0D2DXH1-F1-model_v4 17 424 19 347 0.65 0.7671
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
BCM93534.1 PL0 1 424 1 371 0.7677 0.8376
A0A1V4HJK9 PL22 9 424 3 364 0.7526 0.8301
AF-A0A7I6RVE2-F1-model_v4 PL22_1 8 420 8 375 0.7513 0.8278
AF-A0A7I6Q566-F1-model_v4 PL22_1 8 420 8 375 0.7509 0.8275
AF-A0A6B8N4I5-F1-model_v4 PL22_1 8 420 8 375 0.7504 0.8271
AF-A0A6G9RIJ8-F1-model_v4 PL22_1 8 420 8 375 0.7503 0.8268
AF-L0LZ37-F1-model_v4 PL22_1 8 420 8 371 0.7501 0.8309
AF-A0A3S5XTL1-F1-model_v4 PL22_1 8 420 8 375 0.7499 0.8263
AF-A0A6P1PW20-F1-model_v4 PL22_1 8 420 8 375 0.7496 0.826
AF-A0A345C6M8-F1-model_v4 PL22_1 8 420 8 375 0.7494 0.8257
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A1V4HJK9 PL22 9 424 3 364 0.7526 0.8301
A0A7G8UEZ0 PL22 9 422 4 350 0.744 0.8371
QYY37402.1 PL22 8 423 3 360 0.739 0.8285
UQZ81419.1 PL22_1 8 420 9 372 0.7384 0.8197
A0A378GMG0 PL22_1 8 424 9 386 0.7357 0.806
A0A8J8SII2 PL22 8 424 16 397 0.7342 0.8094
A0A127F489 PL22 8 423 9 365 0.7324 0.8174
W9BCH0 PL22_1 8 424 9 386 0.7323 0.8039
BCS37116.1 PL22 8 424 18 351 0.7316 0.854
A0A7S7SKJ7 PL22 9 424 18 346 0.7312 0.8628
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
3c5m-assembly2.cif.gz_B 8 424 8 377 0.7452 0.821
3c5m-assembly3.cif.gz_C 8 424 8 375 0.745 0.8227
3pe7-assembly1.cif.gz_A 8 424 9 375 0.7436 0.8233
2co0-assembly2.cif.gz_C 18 423 3 304 0.6807 0.8129
4cy5-assembly1.cif.gz_A 18 423 3 303 0.6787 0.8118
3ur4-assembly1.cif.gz_A 18 423 3 303 0.6781 0.8111
5ear-assembly2.cif.gz_B 18 423 3 301 0.6769 0.8111
3ow8-assembly1.cif.gz_A 19 422 1 293 0.6761 0.8141
8bb4-assembly1.cif.gz_Q 18 423 1 297 0.6749 0.8088
4ggd-assembly1.cif.gz_A 17 424 4 312 0.673 0.7974
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P21258-F1-model_v4 8 424 9 387 0.7377 0.8049
AF-Q59418-F1-model_v4 8 424 9 387 0.7372 0.8047
AF-P31455-F1-model_v4 10 424 1 415 0.6759 0.7005
AF-Q6GMD2-F1-model_v4 3 424 1 305 0.6727 0.7983
AF-O18640-F1-model_v4 18 423 3 316 0.6606 0.7799
AF-O42860-F1-model_v4 3 424 1 315 0.6522 0.7702
AF-P42000-F1-model_v4 18 424 104 427 0.5885 0.7757
AF-Q8UEU8-F1-model_v4 11 412 21 293 0.5836 0.7499
AF-P54498-F1-model_v4 2 422 34 340 0.5828 0.7378
AF-Q99LC2-F1-model_v4 17 423 96 429 0.5812 0.7461
Download Full SwissProt Results