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Cluster: HRGMv2_3781_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3781_16 HRGMv2_3781_16_29 39558 41702 + GH95
pfam HRGMv2_3781_16 HRGMv2_3781_16_30 41787 43028 + PGA_cap
TC HRGMv2_3781_16 HRGMv2_3781_16_31 43111 43728 + 2.A.95.1.4
NULL(UNKNOWN) HRGMv2_3781_16 HRGMv2_3781_16_32 44578 44943 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_3781_16 HRGMv2_3781_16_33 44986 45681 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3781_16 HRGMv2_3781_16_34 45701 47674 + GH50
pfam HRGMv2_3781_16 HRGMv2_3781_16_35 47846 48805 - Aldose_epim
pfam HRGMv2_3781_16 HRGMv2_3781_16_36 48991 50292 + MFS_1
TC HRGMv2_3781_16 HRGMv2_3781_16_37 50496 53099 + 3.A.9.1.2
Gene ID: HRGMv2_3781_16_29
Type: CAZyme
Location: 39558 - 41702 (+)
Gene ID: HRGMv2_3781_16_30
Type: pfam
Location: 41787 - 43028 (+)
Gene ID: HRGMv2_3781_16_31
Type: TC
Location: 43111 - 43728 (+)
Gene ID: HRGMv2_3781_16_32
Type:
Location: 44578 - 44943 (-)
Gene ID: HRGMv2_3781_16_33
Type:
Location: 44986 - 45681 (+)
Gene ID: HRGMv2_3781_16_34
Type: CAZyme
Location: 45701 - 47674 (+)
Gene ID: HRGMv2_3781_16_35
Type: pfam
Location: 47846 - 48805 (-)
Gene ID: HRGMv2_3781_16_36
Type: pfam
Location: 48991 - 50292 (+)
Gene ID: HRGMv2_3781_16_37
Type: TC
Location: 50496 - 53099 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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