Cluster: HRGMv2_3781_CGC16
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3781
- CGC Family ID: CGCFAM_06855
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3781_9 | HRGMv2_3781_9_6 | 5284 | 6525 | + | GH29 |
| NULL(UNKNOWN) | HRGMv2_3781_9 | HRGMv2_3781_9_7 | 6546 | 6887 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_3781_9 | HRGMv2_3781_9_8 | 6917 | 7084 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3781_9 | HRGMv2_3781_9_9 | 7169 | 8212 | - | GH179 |
| pfam | HRGMv2_3781_9 | HRGMv2_3781_9_10 | 8455 | 9978 | + | UxaE |
| pfam | HRGMv2_3781_9 | HRGMv2_3781_9_11 | 10035 | 10448 | + | YajC |
| TC | HRGMv2_3781_9 | HRGMv2_3781_9_12 | 10476 | 13067 | + | 2.A.6.4.3 |
Gene ID: HRGMv2_3781_9_6
Type: CAZyme
Location: 5284 - 6525 (+)
Type: CAZyme
Location: 5284 - 6525 (+)
Gene ID: HRGMv2_3781_9_7
Type:
Location: 6546 - 6887 (+)
Type:
Location: 6546 - 6887 (+)
Gene ID: HRGMv2_3781_9_8
Type:
Location: 6917 - 7084 (+)
Type:
Location: 6917 - 7084 (+)
Gene ID: HRGMv2_3781_9_9
Type: CAZyme
Location: 7169 - 8212 (-)
Type: CAZyme
Location: 7169 - 8212 (-)
Gene ID: HRGMv2_3781_9_10
Type: pfam
Location: 8455 - 9978 (+)
Type: pfam
Location: 8455 - 9978 (+)
Gene ID: HRGMv2_3781_9_11
Type: pfam
Location: 10035 - 10448 (+)
Type: pfam
Location: 10035 - 10448 (+)
Gene ID: HRGMv2_3781_9_12
Type: TC
Location: 10476 - 13067 (+)
Type: TC
Location: 10476 - 13067 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Lentisphaeria
Order
Victivallales
Family
Victivallaceae
Genus
Victivallis
Species
Victivallis sp900550905
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.