Genome Details
Selected Rep_genome_ID: HRGMv2_3013
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1279
Species
UMGS1279 sp900550315
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| AG139_25 | 2,183,913 | 95.97% | 0.67% | NA | Africa | H3AfricaPhase2 |
| HRGMv2_3013 | 2,066,746 | 96.64% | 0% | UK | Europe | HRGM |
| Rep_3561 | 2,106,167 | 95.302% | 0% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_3013_CGC20 | CGCFAM_00010 | Yes | 7 | 2 | alpha-glucan |
| HRGMv2_3013_CGC7 | CGCFAM_00425 | Yes | 4 | 1 | |
| HRGMv2_3013_CGC3 | CGCFAM_01279 | Yes | 7 | 1 | |
| HRGMv2_3013_CGC17 | CGCFAM_01467 | Yes | 3 | 1 | |
| HRGMv2_3013_CGC9 | CGCFAM_01579 | Yes | 5 | 1 | |
| HRGMv2_3013_CGC21 | CGCFAM_01835 | Yes | 6 | 1 | |
| HRGMv2_3013_CGC11 | CGCFAM_02119 | Yes | 5 | 1 | |
| HRGMv2_3013_CGC16 | CGCFAM_02440 | Yes | 4 | 2 | |
| HRGMv2_3013_CGC4 | CGCFAM_07284 | Yes | 8 | 2 | |
| HRGMv2_3013_CGC14 | CGCFAM_07285 | Yes | 12 | 2 | |
| HRGMv2_3013_CGC5 | CGCFAM_07286 | Yes | 10 | 3 | |
| HRGMv2_3013_CGC18 | CGCFAM_10282 | Yes | 4 | 1 |
Top CAZyme Families