dbCAN Logo

Cluster: HRGMv2_3013_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3013_2 HRGMv2_3013_2_83 94032 96554 - 4.C.1.1.7
pfam HRGMv2_3013_2 HRGMv2_3013_2_84 96558 97943 - HMGL-like | LeuA_dimer
TC HRGMv2_3013_2 HRGMv2_3013_2_85 98346 99398 - 9.A.23.1.1
pfam HRGMv2_3013_2 HRGMv2_3013_2_86 99458 99868 - RuvX
pfam HRGMv2_3013_2 HRGMv2_3013_2_87 99896 100555 - His_Phos_1
CAZyme HRGMv2_3013_2 HRGMv2_3013_2_88 100905 102779 - GH173
NULL(UNKNOWN) HRGMv2_3013_2 HRGMv2_3013_2_89 102809 104692 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3013_2 HRGMv2_3013_2_90 104714 106600 - GH173
Gene ID: HRGMv2_3013_2_83
Type: TC
Location: 94032 - 96554 (-)
Gene ID: HRGMv2_3013_2_84
Type: pfam
Location: 96558 - 97943 (-)
Gene ID: HRGMv2_3013_2_85
Type: TC
Location: 98346 - 99398 (-)
Gene ID: HRGMv2_3013_2_86
Type: pfam
Location: 99458 - 99868 (-)
Gene ID: HRGMv2_3013_2_87
Type: pfam
Location: 99896 - 100555 (-)
Gene ID: HRGMv2_3013_2_88
Type: CAZyme
Location: 100905 - 102779 (-)
Gene ID: HRGMv2_3013_2_89
Type:
Location: 102809 - 104692 (-)
Gene ID: HRGMv2_3013_2_90
Type: CAZyme
Location: 104714 - 106600 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List