PROTEIN: HRGMv2_3013_2_89
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Protein File & Metadata
Source:
HRGMv2_3013_2_89.pdb
Genome ID:
Protein ID:
HRGMv2_3013_2_89
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Protein Sequence
MRNLQLKNST PVCGDFWGNG AVYHCFAEMP DDENRQYSPK MAELEADRAG KMRLKIARTM 60 YRCWGWDEQQ QAWTWETPEC RALYRWLQRM KDRGITVALN TGWCCPGDVN GTSWNDNPPW 120 ADRDNWEKSL QRYADWVSET VRQLVVLRGF TNIKILVLFT EPRKPGGVMP ATSEPFSETN 180 REPMFRLWND CVNAAAAALR RDGLRDKVLL MGPNCGHLIS AQMLKWTAEN ATEIDLYSSH 240 TYQWNEEPED CDPTEDSGEL TTIAMKTPGG RFCQKVTLKP FTTYKVTVCC RVVKRDPLHL 300 SGNILFGAFD RSQEYISGGG DPTNRLTQHS VKMLDPSKMS TEFCSYSFTF QTQGEVAAKV 360 GVFSDIKHES YLIVNSLSLT EQPDGLELLQ NGDFAQGPLN WDTFCTLGAS DVYYDWRRWC 420 QTGMQYLRPD QPFVFDEYNI GWNRDHSRNE HGANLALSIV AQMNAGVFAN MLWTLFDQIW 480 PNNHTTNGDS FFDGDHRWGL APNLNRSLVP HKSYYAFSMI SKYTGGRGSK VYEGVGEKHL 540 HLTMNELPDG NVTIIVVNNK AQGEKFKITL QKPLKARLFC HRFNPKTVVP NEKAEILPSS 600 GEIELNGTEF FDSIVPYGVT VYTSCNN 627
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0D2G6R2-F1-model_v4 | 1 | 625 | 24 | 470 | 0.6553 |
0.7935 |
| AF-A0A1C1CW80-F1-model_v4 | 1 | 625 | 24 | 449 | 0.6523 |
0.8063 |
| AF-A0A175WEC9-F1-model_v4 | 16 | 626 | 1 | 429 | 0.6503 |
0.7883 |
| AF-U7PR60-F1-model_v4 | 1 | 624 | 29 | 478 | 0.6465 |
0.7845 |
| AF-A0A175VUB6-F1-model_v4 | 1 | 626 | 31 | 480 | 0.6419 |
0.7827 |
| AF-H9L4C2-F1-model_v4 | 1 | 625 | 31 | 443 | 0.6407 |
0.8132 |
| AF-U7PR07-F1-model_v4 | 1 | 626 | 27 | 472 | 0.6401 |
0.7822 |
| AF-U7PK81-F1-model_v4 | 1 | 626 | 24 | 500 | 0.6341 |
0.7471 |
| AF-A0A132Z966-F1-model_v4 | 1 | 626 | 2 | 506 | 0.6241 |
0.7031 |
| AF-U7PTQ8-F1-model_v4 | 1 | 625 | 1 | 490 | 0.6191 |
0.7055 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A401USB0 | GH173 | 1 | 627 | 37 | 489 | 0.7425 |
0.9438 |
| AF-A0A0P0GQ75-F1-model_v4 | GH173 | 1 | 627 | 20 | 485 | 0.7204 |
0.8511 |
| AF-D6CYL6-F1-model_v4 | GH173 | 1 | 627 | 21 | 487 | 0.7199 |
0.8506 |
| AF-D4IJT4-F1-model_v4 | GH173 | 1 | 627 | 27 | 493 | 0.7132 |
0.8482 |
| A0A412D6X8 | GH173 | 1 | 626 | 23 | 490 | 0.713 |
0.8437 |
| AF-A0A1L7I224-F1-model_v4 | GH173 | 1 | 626 | 31 | 494 | 0.7092 |
0.8496 |
| AF-A0A0A7K5X4-F1-model_v4 | GH173 | 1 | 627 | 27 | 514 | 0.7061 |
0.8236 |
| AF-E6X3Y8-F1-model_v4 | GH173 | 1 | 627 | 27 | 514 | 0.706 |
0.8237 |
| AF-F0RG87-F1-model_v4 | GH173 | 1 | 627 | 27 | 514 | 0.706 |
0.8235 |
| A0A7X9TEK1 | GH173 | 1 | 625 | 27 | 521 | 0.7056 |
0.8171 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A401USB0 | GH173 | 1 | 627 | 37 | 489 | 0.7425 |
0.9438 |
| A0A4Y1WIP7 | GH173 | 3 | 626 | 1 | 456 | 0.7286 |
0.8504 |
| A0A412D6X8 | GH173 | 1 | 626 | 23 | 490 | 0.713 |
0.8437 |
| UMW87594.1 | GH173 | 1 | 626 | 26 | 502 | 0.7114 |
0.8366 |
| A0A1L7I224 | GH173 | 1 | 626 | 31 | 494 | 0.7092 |
0.8496 |
| A0A7X9TEK1 | GH173 | 1 | 625 | 27 | 521 | 0.7056 |
0.8171 |
| UZO80939.1 | GH173 | 1 | 627 | 35 | 506 | 0.7045 |
0.8409 |
| A0A415FZM3 | GH173 | 1 | 625 | 39 | 533 | 0.7027 |
0.823 |
| F0RG85 | GH173 | 1 | 626 | 31 | 505 | 0.7004 |
0.8301 |
| A0A402D4Z1 | GH173 | 1 | 627 | 30 | 500 | 0.6996 |
0.8375 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5cxp-assembly1.cif.gz_A-2 | 1 | 625 | 1 | 386 | 0.6971 |
0.8711 |
| 4fmv-assembly1.cif.gz_A | 2 | 626 | 1 | 386 | 0.6895 |
0.8607 |
| 7n6o-assembly2.cif.gz_B | 2 | 626 | 1 | 430 | 0.6877 |
0.8259 |
| 2y24-assembly1.cif.gz_A | 2 | 625 | 1 | 383 | 0.6851 |
0.858 |
| 3kl3-assembly1.cif.gz_A | 1 | 625 | 1 | 389 | 0.6839 |
0.8512 |
| 5a6m-assembly1.cif.gz_A | 1 | 623 | 1 | 389 | 0.6803 |
0.8469 |
| 4uqa-assembly1.cif.gz_A | 1 | 623 | 2 | 391 | 0.6774 |
0.8439 |
| 4uqc-assembly1.cif.gz_A | 1 | 623 | 2 | 390 | 0.6766 |
0.8436 |
| 6m5z-assembly2.cif.gz_B | 2 | 625 | 1 | 432 | 0.6723 |
0.8058 |
| 8idq-assembly2.cif.gz_D | 1 | 625 | 7 | 446 | 0.671 |
0.8032 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q6YK37-F1-model_v4 | 1 | 626 | 33 | 423 | 0.6546 |
0.8491 |
| AF-Q45070-F1-model_v4 | 1 | 626 | 32 | 422 | 0.6545 |
0.848 |
| AF-X4Y2L4-F1-model_v4 | 1 | 625 | 3 | 480 | 0.6291 |
0.731 |
| AF-P94552-F1-model_v4 | 1 | 626 | 2 | 493 | 0.6249 |
0.7121 |
| AF-Q4WBR2-F1-model_v4 | 1 | 626 | 57 | 487 | 0.6132 |
0.7827 |
| AF-O30360-F1-model_v4 | 1 | 626 | 1 | 481 | 0.6074 |
0.7112 |
| AF-P36906-F1-model_v4 | 1 | 626 | 1 | 481 | 0.6068 |
0.7106 |
| AF-G5ECR8-F1-model_v4 | 1 | 625 | 89 | 519 | 0.6042 |
0.7979 |
| AF-Q9ZFM2-F1-model_v4 | 1 | 626 | 1 | 483 | 0.6041 |
0.7076 |
| AF-O16581-F1-model_v4 | 1 | 626 | 83 | 516 | 0.6038 |
0.788 |