Cluster: HRGMv2_3013_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3013
- CGC Family ID: CGCFAM_02119
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3013_6 | HRGMv2_3013_6_19 | 14006 | 14557 | - | 3.A.1.25.5 |
| CAZyme | HRGMv2_3013_6 | HRGMv2_3013_6_20 | 14675 | 15610 | - | CE4 |
| NULL(UNKNOWN) | HRGMv2_3013_6 | HRGMv2_3013_6_21 | 15815 | 16021 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_3013_6 | HRGMv2_3013_6_22 | 16117 | 16224 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3013_6 | HRGMv2_3013_6_23 | 16254 | 17063 | - | 1.A.23.2.2 |
Gene ID: HRGMv2_3013_6_19
Type: TC
Location: 14006 - 14557 (-)
Type: TC
Location: 14006 - 14557 (-)
Gene ID: HRGMv2_3013_6_20
Type: CAZyme
Location: 14675 - 15610 (-)
Type: CAZyme
Location: 14675 - 15610 (-)
Gene ID: HRGMv2_3013_6_21
Type:
Location: 15815 - 16021 (-)
Type:
Location: 15815 - 16021 (-)
Gene ID: HRGMv2_3013_6_22
Type:
Location: 16117 - 16224 (-)
Type:
Location: 16117 - 16224 (-)
Gene ID: HRGMv2_3013_6_23
Type: TC
Location: 16254 - 17063 (-)
Type: TC
Location: 16254 - 17063 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1279
Species
UMGS1279 sp900550315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.