Cluster: HRGMv2_3013_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3013
- CGC Family ID: CGCFAM_02440
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3013_11 | HRGMv2_3013_11_22 | 20756 | 22150 | + | 9.A.11.1.1 |
| CAZyme | HRGMv2_3013_11 | HRGMv2_3013_11_23 | 22277 | 24334 | + | GH3 |
| pfam | HRGMv2_3013_11 | HRGMv2_3013_11_24 | 24899 | 25375 | - | VanZ |
| CAZyme | HRGMv2_3013_11 | HRGMv2_3013_11_25 | 25385 | 27250 | - | GH13_39 |
Gene ID: HRGMv2_3013_11_22
Type: TC
Location: 20756 - 22150 (+)
Type: TC
Location: 20756 - 22150 (+)
Gene ID: HRGMv2_3013_11_23
Type: CAZyme
Location: 22277 - 24334 (+)
Type: CAZyme
Location: 22277 - 24334 (+)
Gene ID: HRGMv2_3013_11_24
Type: pfam
Location: 24899 - 25375 (-)
Type: pfam
Location: 24899 - 25375 (-)
Gene ID: HRGMv2_3013_11_25
Type: CAZyme
Location: 25385 - 27250 (-)
Type: CAZyme
Location: 25385 - 27250 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1279
Species
UMGS1279 sp900550315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.