Cluster: HRGMv2_3013_CGC21
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3013
- CGC Family ID: CGCFAM_01835
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3013_16 | HRGMv2_3013_16_34 | 42440 | 45307 | - | GH2 |
| pfam | HRGMv2_3013_16 | HRGMv2_3013_16_35 | 45514 | 46356 | - | PS_Dcarbxylase |
| pfam | HRGMv2_3013_16 | HRGMv2_3013_16_36 | 46353 | 47057 | - | CDP-OH_P_transf |
| TC | HRGMv2_3013_16 | HRGMv2_3013_16_37 | 47041 | 48105 | - | 4.D.2.1.5 |
| pfam | HRGMv2_3013_16 | HRGMv2_3013_16_38 | 48105 | 48770 | - | PAP2_3 |
| TC | HRGMv2_3013_16 | HRGMv2_3013_16_39 | 48914 | 50047 | - | 2.A.103.1.2 |
Gene ID: HRGMv2_3013_16_34
Type: CAZyme
Location: 42440 - 45307 (-)
Type: CAZyme
Location: 42440 - 45307 (-)
Gene ID: HRGMv2_3013_16_35
Type: pfam
Location: 45514 - 46356 (-)
Type: pfam
Location: 45514 - 46356 (-)
Gene ID: HRGMv2_3013_16_36
Type: pfam
Location: 46353 - 47057 (-)
Type: pfam
Location: 46353 - 47057 (-)
Gene ID: HRGMv2_3013_16_37
Type: TC
Location: 47041 - 48105 (-)
Type: TC
Location: 47041 - 48105 (-)
Gene ID: HRGMv2_3013_16_38
Type: pfam
Location: 48105 - 48770 (-)
Type: pfam
Location: 48105 - 48770 (-)
Gene ID: HRGMv2_3013_16_39
Type: TC
Location: 48914 - 50047 (-)
Type: TC
Location: 48914 - 50047 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1279
Species
UMGS1279 sp900550315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.