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Cluster: HRGMv2_3013_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3013_14 HRGMv2_3013_14_52 53726 55612 + 3.A.3.6.10
TC HRGMv2_3013_14 HRGMv2_3013_14_53 55753 56361 + 3.A.1.1.45
TC HRGMv2_3013_14 HRGMv2_3013_14_54 56449 57087 + 3.A.1.1.45
TC HRGMv2_3013_14 HRGMv2_3013_14_55 57234 58076 + 3.A.1.1.45
TC HRGMv2_3013_14 HRGMv2_3013_14_56 58078 58911 + 3.A.1.1.45
CAZyme HRGMv2_3013_14 HRGMv2_3013_14_57 58914 60434 + GH77
CAZyme HRGMv2_3013_14 HRGMv2_3013_14_58 60418 62706 + GT35
Gene ID: HRGMv2_3013_14_52
Type: TC
Location: 53726 - 55612 (+)
Gene ID: HRGMv2_3013_14_53
Type: TC
Location: 55753 - 56361 (+)
Gene ID: HRGMv2_3013_14_54
Type: TC
Location: 56449 - 57087 (+)
Gene ID: HRGMv2_3013_14_55
Type: TC
Location: 57234 - 58076 (+)
Gene ID: HRGMv2_3013_14_56
Type: TC
Location: 58078 - 58911 (+)
Gene ID: HRGMv2_3013_14_57
Type: CAZyme
Location: 58914 - 60434 (+)
Gene ID: HRGMv2_3013_14_58
Type: CAZyme
Location: 60418 - 62706 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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