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Cluster: HRGMv2_3013_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3013_8 HRGMv2_3013_8_55 59054 60139 - 3.A.1.2.3
TC HRGMv2_3013_8 HRGMv2_3013_8_56 60156 61697 - 3.A.1.2.3
TC HRGMv2_3013_8 HRGMv2_3013_8_57 61801 62874 - 3.A.1.2.3
CAZyme HRGMv2_3013_8 HRGMv2_3013_8_58 63293 64636 - CE17
TF HRGMv2_3013_8 HRGMv2_3013_8_59 64758 65648 - HTH_1
TC HRGMv2_3013_8 HRGMv2_3013_8_60 65765 67483 + 3.A.1.135.5
TC HRGMv2_3013_8 HRGMv2_3013_8_61 67480 69225 + 3.A.1.135.7
pfam HRGMv2_3013_8 HRGMv2_3013_8_62 69354 69584 + FeThRed_B
pfam HRGMv2_3013_8 HRGMv2_3013_8_63 69577 69891 + Thioredoxin | AhpC-TSA | Thioredoxin_2
TC HRGMv2_3013_8 HRGMv2_3013_8_64 69989 70981 + 8.A.5.1.1
pfam HRGMv2_3013_8 HRGMv2_3013_8_65 71101 71610 + DUF1003
CAZyme HRGMv2_3013_8 HRGMv2_3013_8_66 71724 74480 - GH2
Gene ID: HRGMv2_3013_8_55
Type: TC
Location: 59054 - 60139 (-)
Gene ID: HRGMv2_3013_8_56
Type: TC
Location: 60156 - 61697 (-)
Gene ID: HRGMv2_3013_8_57
Type: TC
Location: 61801 - 62874 (-)
Gene ID: HRGMv2_3013_8_58
Type: CAZyme
Location: 63293 - 64636 (-)
Gene ID: HRGMv2_3013_8_59
Type: TF
Location: 64758 - 65648 (-)
Gene ID: HRGMv2_3013_8_60
Type: TC
Location: 65765 - 67483 (+)
Gene ID: HRGMv2_3013_8_61
Type: TC
Location: 67480 - 69225 (+)
Gene ID: HRGMv2_3013_8_62
Type: pfam
Location: 69354 - 69584 (+)
Gene ID: HRGMv2_3013_8_63
Type: pfam
Location: 69577 - 69891 (+)
Gene ID: HRGMv2_3013_8_64
Type: TC
Location: 69989 - 70981 (+)
Gene ID: HRGMv2_3013_8_65
Type: pfam
Location: 71101 - 71610 (+)
Gene ID: HRGMv2_3013_8_66
Type: CAZyme
Location: 71724 - 74480 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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