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Cluster: HRGMv2_3013_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3013_2 HRGMv2_3013_2_48 57086 57574 + 3.D.1.5.1
STP HRGMv2_3013_2 HRGMv2_3013_2_49 57578 58135 + HATPase_c
NULL(UNKNOWN) HRGMv2_3013_2 HRGMv2_3013_2_50 58153 58515 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3013_2 HRGMv2_3013_2_51 58531 60318 + 3.D.1.5.1
STP HRGMv2_3013_2 HRGMv2_3013_2_52 60337 62082 + Fer4
TF HRGMv2_3013_2 HRGMv2_3013_2_53 62339 63166 - HTH_AraC | HTH_AraC
CAZyme HRGMv2_3013_2 HRGMv2_3013_2_54 63331 65655 + GH2
Gene ID: HRGMv2_3013_2_48
Type: TC
Location: 57086 - 57574 (+)
Gene ID: HRGMv2_3013_2_49
Type: STP
Location: 57578 - 58135 (+)
Gene ID: HRGMv2_3013_2_50
Type:
Location: 58153 - 58515 (+)
Gene ID: HRGMv2_3013_2_51
Type: TC
Location: 58531 - 60318 (+)
Gene ID: HRGMv2_3013_2_52
Type: STP
Location: 60337 - 62082 (+)
Gene ID: HRGMv2_3013_2_53
Type: TF
Location: 62339 - 63166 (-)
Gene ID: HRGMv2_3013_2_54
Type: CAZyme
Location: 63331 - 65655 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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