Genome Details
Selected Rep_genome_ID: HRGMv2_3007
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Limivicinus
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR001362 | 2,282,635 | 95.62% | 3.58% | China | Asia | CGMR |
| HRGMv2_3007 | 2,488,483 | 94.96% | 0.671% | UK | Europe | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_3007_CGC12 | CGCFAM_00003 | Yes | 10 | 4 | |
| HRGMv2_3007_CGC18 | CGCFAM_00005 | Yes | 6 | 4 | |
| HRGMv2_3007_CGC9 | CGCFAM_00055 | Yes | 10 | 5 | |
| HRGMv2_3007_CGC8 | CGCFAM_00302 | Yes | 7 | 1 | |
| HRGMv2_3007_CGC7 | CGCFAM_00559 | Yes | 6 | 1 | |
| HRGMv2_3007_CGC4 | CGCFAM_00688 | Yes | 4 | 1 | |
| HRGMv2_3007_CGC20 | CGCFAM_06198 | Yes | 6 | 1 | |
| HRGMv2_3007_CGC5 | CGCFAM_10281 | Yes | 10 | 1 |
Top CAZyme Families