Genome Details
Selected Rep_genome_ID: HRGMv2_2882
Total Genomes Found: 4
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Scatomorpha
Species
Scatomorpha intestinigallinarum
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| AG148_25_sub | 2,691,254 | 91.95% | 0.89% | NA | Africa | H3AfricaPhase2 |
| CGMR039179 | 2,487,095 | 95.64% | 0.89% | China | Asia | CGMR |
| HRGMv2_2882 | 2,612,508 | 95.63% | 0.492% | Japan | Asia | HRGM |
| MGYG000002152 | 2,803,193 | 94.97% | 0.49% | Germany | Europe | UHGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2882_CGC7 | CGCFAM_00045 | Yes | 11 | 2 | alpha-glucan |
| HRGMv2_2882_CGC4 | CGCFAM_00166 | Yes | 3 | 1 | |
| HRGMv2_2882_CGC23 | CGCFAM_00173 | Yes | 8 | 1 | |
| HRGMv2_2882_CGC20 | CGCFAM_00455 | Yes | 3 | 1 | |
| HRGMv2_2882_CGC5 | CGCFAM_00651 | Yes | 8 | 3 | |
| HRGMv2_2882_CGC11 | CGCFAM_00989 | Yes | 4 | 1 | |
| HRGMv2_2882_CGC1 | CGCFAM_01538 | Yes | 4 | 1 | |
| HRGMv2_2882_CGC8 | CGCFAM_01632 | Yes | 5 | 2 | |
| HRGMv2_2882_CGC12 | CGCFAM_01753 | Yes | 4 | 1 | |
| HRGMv2_2882_CGC16 | CGCFAM_04073 | Yes | 9 | 1 | |
| HRGMv2_2882_CGC17 | CGCFAM_07181 | Yes | 3 | 1 | |
| HRGMv2_2882_CGC15 | CGCFAM_10207 | Yes | 7 | 1 |
Top CAZyme Families