Cluster: HRGMv2_2882_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2882
- CGC Family ID: CGCFAM_00989
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2882_14 | HRGMv2_2882_14_57 | 45430 | 47568 | - | GH65 |
| pfam | HRGMv2_2882_14 | HRGMv2_2882_14_58 | 47558 | 49333 | - | Glyco_hydro_125 |
| TF | HRGMv2_2882_14 | HRGMv2_2882_14_59 | 49525 | 50544 | + | LacI |
| TC | HRGMv2_2882_14 | HRGMv2_2882_14_60 | 50710 | 52017 | + | 3.A.1.1.44 |
Gene ID: HRGMv2_2882_14_57
Type: CAZyme
Location: 45430 - 47568 (-)
Type: CAZyme
Location: 45430 - 47568 (-)
Gene ID: HRGMv2_2882_14_58
Type: pfam
Location: 47558 - 49333 (-)
Type: pfam
Location: 47558 - 49333 (-)
Gene ID: HRGMv2_2882_14_59
Type: TF
Location: 49525 - 50544 (+)
Type: TF
Location: 49525 - 50544 (+)
Gene ID: HRGMv2_2882_14_60
Type: TC
Location: 50710 - 52017 (+)
Type: TC
Location: 50710 - 52017 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Scatomorpha
Species
Scatomorpha intestinigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.