Cluster: HRGMv2_2882_CGC15
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2882
- CGC Family ID: CGCFAM_10207
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2882_22 | HRGMv2_2882_22_10 | 8585 | 9427 | - | 3.A.1.1.23 |
| TC | HRGMv2_2882_22 | HRGMv2_2882_22_11 | 9444 | 10325 | - | 3.A.1.1.11 |
| STP | HRGMv2_2882_22 | HRGMv2_2882_22_12 | 10401 | 11732 | - | SBP_bac_1 |
| pfam | HRGMv2_2882_22 | HRGMv2_2882_22_13 | 12116 | 12802 | + | DeoC |
| CAZyme | HRGMv2_2882_22 | HRGMv2_2882_22_14 | 12886 | 15852 | + | GH2 |
| TF | HRGMv2_2882_22 | HRGMv2_2882_22_15 | 15890 | 16669 | + | GntR |
| TC | HRGMv2_2882_22 | HRGMv2_2882_22_16 | 16699 | 18432 | + | 9.B.33.1.1 |
Gene ID: HRGMv2_2882_22_10
Type: TC
Location: 8585 - 9427 (-)
Type: TC
Location: 8585 - 9427 (-)
Gene ID: HRGMv2_2882_22_11
Type: TC
Location: 9444 - 10325 (-)
Type: TC
Location: 9444 - 10325 (-)
Gene ID: HRGMv2_2882_22_12
Type: STP
Location: 10401 - 11732 (-)
Type: STP
Location: 10401 - 11732 (-)
Gene ID: HRGMv2_2882_22_13
Type: pfam
Location: 12116 - 12802 (+)
Type: pfam
Location: 12116 - 12802 (+)
Gene ID: HRGMv2_2882_22_14
Type: CAZyme
Location: 12886 - 15852 (+)
Type: CAZyme
Location: 12886 - 15852 (+)
Gene ID: HRGMv2_2882_22_15
Type: TF
Location: 15890 - 16669 (+)
Type: TF
Location: 15890 - 16669 (+)
Gene ID: HRGMv2_2882_22_16
Type: TC
Location: 16699 - 18432 (+)
Type: TC
Location: 16699 - 18432 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Scatomorpha
Species
Scatomorpha intestinigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.