dbCAN HGM

Cluster: HRGMv2_2882_CGC23

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_2882_60	HRGMv2_2882_60_1	348	1154	-	3.D.6.1.3
TC	HRGMv2_2882_60	HRGMv2_2882_60_2	1169	1750	-	3.D.6.1.2
TC	HRGMv2_2882_60	HRGMv2_2882_60_3	1750	2460	-	3.D.6.1.2
pfam	HRGMv2_2882_60	HRGMv2_2882_60_4	2476	3024	-	FMN_bind
TC	HRGMv2_2882_60	HRGMv2_2882_60_5	3017	4057	-	3.D.6.1.2
TC	HRGMv2_2882_60	HRGMv2_2882_60_6	4057	5433	-	3.D.6.1.2
TC	HRGMv2_2882_60	HRGMv2_2882_60_7	5755	7044	+	2.A.1.84.3
CAZyme	HRGMv2_2882_60	HRGMv2_2882_60_8	7031	8752	+	GH2

Gene ID: HRGMv2_2882_60_1
Type: TC
Location: 348 - 1154 (-)

Gene ID: HRGMv2_2882_60_2
Type: TC
Location: 1169 - 1750 (-)

Gene ID: HRGMv2_2882_60_3
Type: TC
Location: 1750 - 2460 (-)

Gene ID: HRGMv2_2882_60_4
Type: pfam
Location: 2476 - 3024 (-)

Gene ID: HRGMv2_2882_60_5
Type: TC
Location: 3017 - 4057 (-)

Gene ID: HRGMv2_2882_60_6
Type: TC
Location: 4057 - 5433 (-)

Gene ID: HRGMv2_2882_60_7
Type: TC
Location: 5755 - 7044 (+)

Gene ID: HRGMv2_2882_60_8
Type: CAZyme
Location: 7031 - 8752 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_2882_60_1	vegetarian > omnivore	1.50345	0.00050
HRGMv2_2882_60_3	vegetarian > omnivore	1.00611	0.00050
HRGMv2_2882_60_4	vegetarian > omnivore	1.02398	0.00050
HRGMv2_2882_60_6	vegetarian > omnivore	1.47505	0.00050
HRGMv2_2882_60_7	vegetarian > vegan	1.81671	0.00364