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Cluster: HRGMv2_2882_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2882_6 HRGMv2_2882_6_56 62998 64074 + GH179
sulfatase HRGMv2_2882_6 HRGMv2_2882_6_57 64078 64806 + S1_9
TC HRGMv2_2882_6 HRGMv2_2882_6_58 64859 65455 - 2.A.76.1.4
TF HRGMv2_2882_6 HRGMv2_2882_6_59 65572 66129 + HTH_3
CAZyme HRGMv2_2882_6 HRGMv2_2882_6_60 66442 67707 + GH1
CAZyme HRGMv2_2882_6 HRGMv2_2882_6_61 67670 69997 + GH36
peptidase HRGMv2_2882_6 HRGMv2_2882_6_62 69994 71208 + M20.003
TC HRGMv2_2882_6 HRGMv2_2882_6_63 71223 72584 + 2.A.2.2.1
Gene ID: HRGMv2_2882_6_56
Type: CAZyme
Location: 62998 - 64074 (+)
Gene ID: HRGMv2_2882_6_57
Type: sulfatase
Location: 64078 - 64806 (+)
Gene ID: HRGMv2_2882_6_58
Type: TC
Location: 64859 - 65455 (-)
Gene ID: HRGMv2_2882_6_59
Type: TF
Location: 65572 - 66129 (+)
Gene ID: HRGMv2_2882_6_60
Type: CAZyme
Location: 66442 - 67707 (+)
Gene ID: HRGMv2_2882_6_61
Type: CAZyme
Location: 67670 - 69997 (+)
Gene ID: HRGMv2_2882_6_62
Type: peptidase
Location: 69994 - 71208 (+)
Gene ID: HRGMv2_2882_6_63
Type: TC
Location: 71223 - 72584 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2882_6_60 vegetarian > vegan 1.15465 0.00364
HRGMv2_2882_6_61 vegetarian > vegan 1.13626 0.00364
HRGMv2_2882_6_63 vegetarian > vegan 1.07200 0.00364

🧭 Explore Read Mapping of CGC

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