Cluster: HRGMv2_2882_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2882
- CGC Family ID: CGCFAM_01753
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2882_15 | HRGMv2_2882_15_1 | 116 | 1033 | + | 3.A.1.1.11 |
| TC | HRGMv2_2882_15 | HRGMv2_2882_15_2 | 1023 | 1850 | + | 3.A.1.1.39 |
| CAZyme | HRGMv2_2882_15 | HRGMv2_2882_15_3 | 1860 | 3623 | + | GH31_7 |
| TC | HRGMv2_2882_15 | HRGMv2_2882_15_4 | 3838 | 5364 | + | 3.A.1.120.2 |
Gene ID: HRGMv2_2882_15_1
Type: TC
Location: 116 - 1033 (+)
Type: TC
Location: 116 - 1033 (+)
Gene ID: HRGMv2_2882_15_2
Type: TC
Location: 1023 - 1850 (+)
Type: TC
Location: 1023 - 1850 (+)
Gene ID: HRGMv2_2882_15_3
Type: CAZyme
Location: 1860 - 3623 (+)
Type: CAZyme
Location: 1860 - 3623 (+)
Gene ID: HRGMv2_2882_15_4
Type: TC
Location: 3838 - 5364 (+)
Type: TC
Location: 3838 - 5364 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Scatomorpha
Species
Scatomorpha intestinigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.