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Cluster: HRGMv2_2882_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2882_27 HRGMv2_2882_27_10 7608 9284 - 8.A.59.2.1
TC HRGMv2_2882_27 HRGMv2_2882_27_11 9281 10291 - 3.A.1.20.1
pfam HRGMv2_2882_27 HRGMv2_2882_27_12 10292 11086 - Hydrolase_3
TC HRGMv2_2882_27 HRGMv2_2882_27_13 11147 12793 - 3.A.1.1.16
TC HRGMv2_2882_27 HRGMv2_2882_27_14 12797 14623 - 3.A.1.20.2
NULL(UNKNOWN) HRGMv2_2882_27 HRGMv2_2882_27_15 14721 16121 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2882_27 HRGMv2_2882_27_16 16333 17127 - Inositol_P
TC HRGMv2_2882_27 HRGMv2_2882_27_17 17244 17684 + 9.A.11.1.1
CAZyme HRGMv2_2882_27 HRGMv2_2882_27_18 17759 19063 + GH13_20
Gene ID: HRGMv2_2882_27_10
Type: TC
Location: 7608 - 9284 (-)
Gene ID: HRGMv2_2882_27_11
Type: TC
Location: 9281 - 10291 (-)
Gene ID: HRGMv2_2882_27_12
Type: pfam
Location: 10292 - 11086 (-)
Gene ID: HRGMv2_2882_27_13
Type: TC
Location: 11147 - 12793 (-)
Gene ID: HRGMv2_2882_27_14
Type: TC
Location: 12797 - 14623 (-)
Gene ID: HRGMv2_2882_27_15
Type:
Location: 14721 - 16121 (-)
Gene ID: HRGMv2_2882_27_16
Type: pfam
Location: 16333 - 17127 (-)
Gene ID: HRGMv2_2882_27_17
Type: TC
Location: 17244 - 17684 (+)
Gene ID: HRGMv2_2882_27_18
Type: CAZyme
Location: 17759 - 19063 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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