PROTEIN: HRGMv2_2882_27_15
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Protein File & Metadata
Source:
HRGMv2_2882_27_15.pdb
Genome ID:
Protein ID:
HRGMv2_2882_27_15
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Protein Sequence
MKKLLSLLLV AMMLVGLLAG CGSEPAPASN PPAADGDASA PPADDTPEVE LTATQKIIAE 60 AETMTLEELA AKAIEESNGK TFFGVGNSSR GKTALPLFIE YLQSIDPNYT LEYDWQQPKN 120 NKIFDQLTAD SLKDVGTFAM TLIQDGNQIE SKMVQTGILD TFIPKDWAEA NGTTAADYDG 180 YLPLQTLNKV FMFNNTGSKT YDNCWDFVAE GEHGLFMDID SEVVGKNFLY MLTSDTYSAW 240 LKEAFDALSA EEQAYFQPTI DAMAADAADL GLGENGKYAL AWIKLWVGSY NAQTDDGPIC 300 NTLVDASATD QFGLLVYSKL RSVEESASVS KNNITIAAYN DGYTGIGGYG YCHYLFVTEN 360 SPLPWTACAF IAYMTCTADG FSAWGKDIGG YSSNPNVAAE NEEIFQHQTG GMAEDGTTVE 420 FAALNDAGYD WWTTDGKLVL EDPEYCASVS FTVGSWIETL DKYSVS 466
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P76223-F1-model_v4 | 61 | 464 | 15 | 388 | 0.6267 |
0.723 |
| AF-A0A0H3GLS6-F1-model_v4 | 60 | 464 | 20 | 392 | 0.6243 |
0.7261 |
| AF-Q9I1Q8-F1-model_v4 | 71 | 460 | 57 | 363 | 0.5158 |
0.6882 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 2pt2-assembly1.cif.gz_A | 77 | 463 | 1 | 316 | 0.6847 |
0.8283 |
| 1mrp-assembly1.cif.gz_A | 81 | 463 | 1 | 309 | 0.6826 |
0.8323 |
| 1q35-assembly1.cif.gz_A | 79 | 466 | 1 | 317 | 0.6821 |
0.8243 |
| 7li0-assembly1.cif.gz_A | 77 | 463 | 1 | 312 | 0.6815 |
0.8287 |
| 1y4t-assembly2.cif.gz_D | 81 | 463 | 1 | 316 | 0.6802 |
0.8229 |
| 1xvx-assembly1.cif.gz_A | 77 | 463 | 1 | 311 | 0.6783 |
0.8261 |
| 1d9y-assembly1.cif.gz_A | 81 | 463 | 1 | 309 | 0.6761 |
0.8251 |
| 1xvy-assembly1.cif.gz_A | 81 | 463 | 1 | 307 | 0.6732 |
0.8243 |
| 8ogg-assembly1.cif.gz_A | 76 | 463 | 1 | 312 | 0.6729 |
0.8186 |
| 7f6r-assembly1.cif.gz_A | 64 | 465 | 4 | 337 | 0.67 |
0.7975 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P21408-F1-model_v4 | 75 | 463 | 26 | 338 | 0.6542 |
0.8265 |
| AF-P76223-F1-model_v4 | 61 | 464 | 15 | 388 | 0.6267 |
0.723 |
| AF-A0QXD9-F1-model_v4 | 49 | 465 | 44 | 457 | 0.5948 |
0.6894 |
| AF-P29822-F1-model_v4 | 75 | 464 | 24 | 401 | 0.5868 |
0.698 |
| AF-P94528-F1-model_v4 | 77 | 464 | 31 | 414 | 0.5824 |
0.6922 |
| AF-Q7LYW7-F1-model_v4 | 68 | 466 | 38 | 428 | 0.5813 |
0.6888 |
| AF-Q9Z3R5-F1-model_v4 | 65 | 464 | 44 | 441 | 0.5787 |
0.6814 |
| AF-Q9KEE7-F1-model_v4 | 77 | 466 | 42 | 424 | 0.5763 |
0.6942 |
| AF-Q9V297-F1-model_v4 | 22 | 466 | 1 | 433 | 0.5551 |
0.6045 |