Genome Details
Selected Rep_genome_ID: HRGMv2_2807
Total Genomes Found: 10
Total Genomes Found: 10
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Vescimonas
Species
Vescimonas sp900545495
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR039786 | 2,043,542 | 93.96% | 1.37% | China | Asia | CGMR |
| CGMR065048 | 2,056,640 | 91.28% | 0.73% | China | Asia | CGMR |
| GCA_021620465.1_ASM2162046v1_genomic | 2,052,326 | 93.29% | 1.34% | NA | Africa | H3AfricaPhase1 |
| GCA_021622235.1_ASM2162223v1_genomic | 2,407,500 | 93.75% | 2.68% | NA | Africa | H3AfricaPhase1 |
| GCA_021636755.1_ASM2163675v1_genomic | 1,946,023 | 92.62% | 1.68% | NA | Africa | H3AfricaPhase1 |
| GCA_021637845.1_ASM2163784v1_genomic | 2,076,610 | 91.49% | 3.05% | NA | Africa | H3AfricaPhase1 |
| HRGMv2_2807 | 2,423,784 | 93.95% | 0.671% | South Korea | Asia | HRGM |
| MGYG000000877 | 2,052,192 | 93.96% | 0.73% | Netherlands | Europe | UHGG |
| Rep_3221 | 2,138,479 | 93.2886% | 0.915192% | NA | NA | WIS |
| SW115_bin.76 | 1,981,295 | 93.29% | 0.67% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2807_CGC2 | CGCFAM_00004 | Yes | 6 | 3 | alpha-glucan |
| HRGMv2_2807_CGC7 | CGCFAM_00045 | Yes | 6 | 2 | alpha-glucan |
| HRGMv2_2807_CGC4 | CGCFAM_00055 | Yes | 4 | 1 | |
| HRGMv2_2807_CGC8 | CGCFAM_01355 | Yes | 12 | 1 | |
| HRGMv2_2807_CGC5 | CGCFAM_01359 | Yes | 3 | 1 | |
| HRGMv2_2807_CGC10 | CGCFAM_06173 | Yes | 7 | 1 | |
| HRGMv2_2807_CGC9 | CGCFAM_09129 | Yes | 3 | 1 | |
| HRGMv2_2807_CGC1 | CGCFAM_10184 | Yes | 6 | 1 |
Top CAZyme Families