Cluster: HRGMv2_2807_CGC9
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2807
- CGC Family ID: CGCFAM_09129
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2807_13 | HRGMv2_2807_13_51 | 45831 | 46646 | - | GT8 |
| pfam | HRGMv2_2807_13 | HRGMv2_2807_13_52 | 46764 | 49436 | - | Sulfatase |
| TC | HRGMv2_2807_13 | HRGMv2_2807_13_53 | 49687 | 50379 | + | 2.A.38.4.1 |
Gene ID: HRGMv2_2807_13_51
Type: CAZyme
Location: 45831 - 46646 (-)
Type: CAZyme
Location: 45831 - 46646 (-)
Gene ID: HRGMv2_2807_13_52
Type: pfam
Location: 46764 - 49436 (-)
Type: pfam
Location: 46764 - 49436 (-)
Gene ID: HRGMv2_2807_13_53
Type: TC
Location: 49687 - 50379 (+)
Type: TC
Location: 49687 - 50379 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Vescimonas
Species
Vescimonas sp900545495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2807_13_51 | vegetarian > vegan | 1.31957 | 0.00229 |
| HRGMv2_2807_13_53 | vegetarian > vegan | 1.11267 | 0.00229 |