dbCAN Logo

Cluster: HRGMv2_2807_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2807_8 HRGMv2_2807_8_70 67736 69043 + 3.A.1.1.45
TC HRGMv2_2807_8 HRGMv2_2807_8_71 69208 70059 + 3.A.1.1.45
TC HRGMv2_2807_8 HRGMv2_2807_8_72 70059 70901 + 3.A.1.1.45
CAZyme HRGMv2_2807_8 HRGMv2_2807_8_73 70986 72524 + GH77
TC HRGMv2_2807_8 HRGMv2_2807_8_74 72588 73925 - 2.A.40.1.4
pfam HRGMv2_2807_8 HRGMv2_2807_8_75 74309 75064 + BPL_C | BPL_LplA_LipB
TC HRGMv2_2807_8 HRGMv2_2807_8_76 75074 75616 + 2.A.51.1.6
TC HRGMv2_2807_8 HRGMv2_2807_8_77 75616 76176 + 2.A.51.1.6
pfam HRGMv2_2807_8 HRGMv2_2807_8_78 76426 77070 + DUF3793
pfam HRGMv2_2807_8 HRGMv2_2807_8_79 77091 77849 + Exo_endo_phos
TC HRGMv2_2807_8 HRGMv2_2807_8_80 77889 79244 - 2.A.40.2.1
TC HRGMv2_2807_8 HRGMv2_2807_8_81 79438 80682 - 9.A.40.2.4
Gene ID: HRGMv2_2807_8_70
Type: TC
Location: 67736 - 69043 (+)
Gene ID: HRGMv2_2807_8_71
Type: TC
Location: 69208 - 70059 (+)
Gene ID: HRGMv2_2807_8_72
Type: TC
Location: 70059 - 70901 (+)
Gene ID: HRGMv2_2807_8_73
Type: CAZyme
Location: 70986 - 72524 (+)
Gene ID: HRGMv2_2807_8_74
Type: TC
Location: 72588 - 73925 (-)
Gene ID: HRGMv2_2807_8_75
Type: pfam
Location: 74309 - 75064 (+)
Gene ID: HRGMv2_2807_8_76
Type: TC
Location: 75074 - 75616 (+)
Gene ID: HRGMv2_2807_8_77
Type: TC
Location: 75616 - 76176 (+)
Gene ID: HRGMv2_2807_8_78
Type: pfam
Location: 76426 - 77070 (+)
Gene ID: HRGMv2_2807_8_79
Type: pfam
Location: 77091 - 77849 (+)
Gene ID: HRGMv2_2807_8_80
Type: TC
Location: 77889 - 79244 (-)
Gene ID: HRGMv2_2807_8_81
Type: TC
Location: 79438 - 80682 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2807_8_75 vegetarian > omnivore 3.00467 0.00364
HRGMv2_2807_8_78 vegetarian > omnivore 1.00614 0.00364

🧭 Explore Read Mapping of CGC

← Back to Cluster List