Cluster: HRGMv2_2807_CGC5
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2807
- CGC Family ID: CGCFAM_01359
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2807_5 | HRGMv2_2807_5_130 | 144472 | 145863 | + | 2.A.66.1.45 |
| pfam | HRGMv2_2807_5 | HRGMv2_2807_5_131 | 145860 | 146690 | + | Ubie_methyltran | Methyltransf_11 | Methyltransf_25 | Methyltransf_31 | Zn_ribbon_RlmA |
| CAZyme | HRGMv2_2807_5 | HRGMv2_2807_5_132 | 146695 | 147615 | + | GH25 |
Gene ID: HRGMv2_2807_5_130
Type: TC
Location: 144472 - 145863 (+)
Type: TC
Location: 144472 - 145863 (+)
Gene ID: HRGMv2_2807_5_131
Type: pfam
Location: 145860 - 146690 (+)
Type: pfam
Location: 145860 - 146690 (+)
Gene ID: HRGMv2_2807_5_132
Type: CAZyme
Location: 146695 - 147615 (+)
Type: CAZyme
Location: 146695 - 147615 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Vescimonas
Species
Vescimonas sp900545495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2807_5_130 | vegetarian > vegan | 1.10644 | 0.00229 |
| HRGMv2_2807_5_132 | vegetarian > omnivore | 1.69142 | 0.00364 |