Genome Details
Selected Rep_genome_ID: HRGMv2_2572
Total Genomes Found: 4
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus faecavium
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR026487 | 1,463,893 | 97.18% | 0.69% | China | Asia | CGMR |
| HRGMv2_2572 | 1,504,790 | 99.43% | 0.749% | Tanzania | Africa | HRGM |
| MGYG000003357 | 1,593,339 | 98.5% | 0.75% | China | Asia | UHGG |
| SW169_75 | 1,408,139 | 96.71% | 1.87% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2572_CGC16 | CGCFAM_00066 | Yes | 3 | 1 | beta-mannan |
| HRGMv2_2572_CGC12 | CGCFAM_00354 | Yes | 8 | 1 | |
| HRGMv2_2572_CGC11 | CGCFAM_00416 | Yes | 6 | 1 | |
| HRGMv2_2572_CGC7 | CGCFAM_04138 | Yes | 13 | 6 | |
| HRGMv2_2572_CGC15 | CGCFAM_06886 | Yes | 6 | 1 | |
| HRGMv2_2572_CGC5 | CGCFAM_08843 | Yes | 8 | 2 | |
| HRGMv2_2572_CGC4 | CGCFAM_08998 | Yes | 7 | 1 | |
| HRGMv2_2572_CGC10 | CGCFAM_10099 | Yes | 6 | 1 | |
| HRGMv2_2572_CGC6 | CGCFAM_10110 | Yes | 8 | 1 |
Top CAZyme Families