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Cluster: HRGMv2_2572_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2572_27 HRGMv2_2572_27_1 1 525 + GT5
pfam HRGMv2_2572_27 HRGMv2_2572_27_2 730 939 + ATP-synt_C
TC HRGMv2_2572_27 HRGMv2_2572_27_3 970 1680 + 3.A.2.1.2
pfam HRGMv2_2572_27 HRGMv2_2572_27_4 1701 2198 + ATP-synt_B
pfam HRGMv2_2572_27 HRGMv2_2572_27_5 2198 2734 + OSCP
TC HRGMv2_2572_27 HRGMv2_2572_27_6 2750 4255 + 3.A.2.1.6
TC HRGMv2_2572_27 HRGMv2_2572_27_7 4270 5148 + 3.A.2.1.5
TC HRGMv2_2572_27 HRGMv2_2572_27_8 5207 6613 + 3.A.2.1.5
Gene ID: HRGMv2_2572_27_1
Type: CAZyme
Location: 1 - 525 (+)
Gene ID: HRGMv2_2572_27_2
Type: pfam
Location: 730 - 939 (+)
Gene ID: HRGMv2_2572_27_3
Type: TC
Location: 970 - 1680 (+)
Gene ID: HRGMv2_2572_27_4
Type: pfam
Location: 1701 - 2198 (+)
Gene ID: HRGMv2_2572_27_5
Type: pfam
Location: 2198 - 2734 (+)
Gene ID: HRGMv2_2572_27_6
Type: TC
Location: 2750 - 4255 (+)
Gene ID: HRGMv2_2572_27_7
Type: TC
Location: 4270 - 5148 (+)
Gene ID: HRGMv2_2572_27_8
Type: TC
Location: 5207 - 6613 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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