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Cluster: HRGMv2_2572_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2572_12 HRGMv2_2572_12_12 12972 13613 + 3.A.1.3.15
TC HRGMv2_2572_12 HRGMv2_2572_12_13 13625 14254 + 3.A.1.3.2
TC HRGMv2_2572_12 HRGMv2_2572_12_14 14268 15110 + 3.A.1.3.27
pfam HRGMv2_2572_12 HRGMv2_2572_12_15 15148 15819 + ICMT | PEMT
TC HRGMv2_2572_12 HRGMv2_2572_12_16 15863 17056 - 2.A.4.7.6
TC HRGMv2_2572_12 HRGMv2_2572_12_17 17102 18433 - 2.A.25.1.4
TC HRGMv2_2572_12 HRGMv2_2572_12_18 19049 20173 + 2.A.86.1.8
CAZyme HRGMv2_2572_12 HRGMv2_2572_12_19 20182 21018 + GT8
Gene ID: HRGMv2_2572_12_12
Type: TC
Location: 12972 - 13613 (+)
Gene ID: HRGMv2_2572_12_13
Type: TC
Location: 13625 - 14254 (+)
Gene ID: HRGMv2_2572_12_14
Type: TC
Location: 14268 - 15110 (+)
Gene ID: HRGMv2_2572_12_15
Type: pfam
Location: 15148 - 15819 (+)
Gene ID: HRGMv2_2572_12_16
Type: TC
Location: 15863 - 17056 (-)
Gene ID: HRGMv2_2572_12_17
Type: TC
Location: 17102 - 18433 (-)
Gene ID: HRGMv2_2572_12_18
Type: TC
Location: 19049 - 20173 (+)
Gene ID: HRGMv2_2572_12_19
Type: CAZyme
Location: 20182 - 21018 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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