Cluster: HRGMv2_2572_CGC16
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate: beta-mannan
- Genome ID: HRGMv2_2572
- CGC Family ID: CGCFAM_00066
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2572_36 | HRGMv2_2572_36_5 | 5545 | 6852 | - | GH1 |
| NULL(UNKNOWN) | HRGMv2_2572_36 | HRGMv2_2572_36_6 | 7091 | 7300 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2572_36 | HRGMv2_2572_36_7 | 7310 | 8215 | + | 4.A.3.2.8 |
Gene ID: HRGMv2_2572_36_5
Type: CAZyme
Location: 5545 - 6852 (-)
Type: CAZyme
Location: 5545 - 6852 (-)
Gene ID: HRGMv2_2572_36_6
Type:
Location: 7091 - 7300 (+)
Type:
Location: 7091 - 7300 (+)
Gene ID: HRGMv2_2572_36_7
Type: TC
Location: 7310 - 8215 (+)
Type: TC
Location: 7310 - 8215 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus faecavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.