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Cluster: HRGMv2_2572_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2572_7 HRGMv2_2572_7_12 10416 11018 + GH23
TC HRGMv2_2572_7 HRGMv2_2572_7_13 11041 12771 + 3.A.1.135.5
TC HRGMv2_2572_7 HRGMv2_2572_7_14 12768 14510 + 3.A.1.135.5
NULL(UNKNOWN) HRGMv2_2572_7 HRGMv2_2572_7_15 14553 14795 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_2572_7 HRGMv2_2572_7_16 14797 14958 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2572_7 HRGMv2_2572_7_17 14992 16449 - GH13_5
peptidase HRGMv2_2572_7 HRGMv2_2572_7_18 16984 18546 + C26.957
TC HRGMv2_2572_7 HRGMv2_2572_7_19 18793 20127 + 2.A.66.1.28
Gene ID: HRGMv2_2572_7_12
Type: CAZyme
Location: 10416 - 11018 (+)
Gene ID: HRGMv2_2572_7_13
Type: TC
Location: 11041 - 12771 (+)
Gene ID: HRGMv2_2572_7_14
Type: TC
Location: 12768 - 14510 (+)
Gene ID: HRGMv2_2572_7_15
Type:
Location: 14553 - 14795 (-)
Gene ID: HRGMv2_2572_7_16
Type:
Location: 14797 - 14958 (-)
Gene ID: HRGMv2_2572_7_17
Type: CAZyme
Location: 14992 - 16449 (-)
Gene ID: HRGMv2_2572_7_18
Type: peptidase
Location: 16984 - 18546 (+)
Gene ID: HRGMv2_2572_7_19
Type: TC
Location: 18793 - 20127 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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