Genome Details
Selected Rep_genome_ID: HRGMv2_2499
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus oralis_BY
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_2499 | 1,949,376 | 99.86% | 0.199% | UK | Europe | HRGM |
| Rep_1148 | 1,819,449 | 98.1895% | 0.199203% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2499_CGC9 | CGCFAM_00102 | Yes | 8 | 3 | |
| HRGMv2_2499_CGC16 | CGCFAM_00311 | Yes | 10 | 4 | host glycan |
| HRGMv2_2499_CGC11 | CGCFAM_00402 | Yes | 16 | 5 | |
| HRGMv2_2499_CGC22 | CGCFAM_01064 | Yes | 14 | 3 | |
| HRGMv2_2499_CGC19 | CGCFAM_01081 | Yes | 13 | 2 | |
| HRGMv2_2499_CGC7 | CGCFAM_01421 | Yes | 8 | 2 | |
| HRGMv2_2499_CGC6 | CGCFAM_02151 | Yes | 3 | 1 | |
| HRGMv2_2499_CGC10 | CGCFAM_02808 | Yes | 3 | 2 | |
| HRGMv2_2499_CGC21 | CGCFAM_04057 | Yes | 8 | 1 |
Top CAZyme Families