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Cluster: HRGMv2_2499_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2499_3 HRGMv2_2499_3_237 260095 260982 - 2.A.4.1.7
STP HRGMv2_2499_3 HRGMv2_2499_3_238 261115 261669 + TetR_N
NULL(UNKNOWN) HRGMv2_2499_3 HRGMv2_2499_3_239 261696 262028 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2499_3 HRGMv2_2499_3_240 262063 262854 - 4.B.1.1.2
TC HRGMv2_2499_3 HRGMv2_2499_3_241 263297 264817 - 3.A.1.12.8
TC HRGMv2_2499_3 HRGMv2_2499_3_242 264810 265538 - 3.A.1.12.8
TF HRGMv2_2499_3 HRGMv2_2499_3_243 265611 266054 - MarR
TC HRGMv2_2499_3 HRGMv2_2499_3_244 266199 267470 - 9.B.67.1.2
CAZyme HRGMv2_2499_3 HRGMv2_2499_3_245 267524 268966 - GH13_18
TC HRGMv2_2499_3 HRGMv2_2499_3_246 269163 269996 - 3.A.1.1.28
TC HRGMv2_2499_3 HRGMv2_2499_3_247 270013 270885 - 3.A.1.1.28
TC HRGMv2_2499_3 HRGMv2_2499_3_248 270904 272154 - 3.A.1.1.28
CAZyme HRGMv2_2499_3 HRGMv2_2499_3_249 272189 274351 - GH36
Gene ID: HRGMv2_2499_3_237
Type: TC
Location: 260095 - 260982 (-)
Gene ID: HRGMv2_2499_3_238
Type: STP
Location: 261115 - 261669 (+)
Gene ID: HRGMv2_2499_3_239
Type:
Location: 261696 - 262028 (+)
Gene ID: HRGMv2_2499_3_240
Type: TC
Location: 262063 - 262854 (-)
Gene ID: HRGMv2_2499_3_241
Type: TC
Location: 263297 - 264817 (-)
Gene ID: HRGMv2_2499_3_242
Type: TC
Location: 264810 - 265538 (-)
Gene ID: HRGMv2_2499_3_243
Type: TF
Location: 265611 - 266054 (-)
Gene ID: HRGMv2_2499_3_244
Type: TC
Location: 266199 - 267470 (-)
Gene ID: HRGMv2_2499_3_245
Type: CAZyme
Location: 267524 - 268966 (-)
Gene ID: HRGMv2_2499_3_246
Type: TC
Location: 269163 - 269996 (-)
Gene ID: HRGMv2_2499_3_247
Type: TC
Location: 270013 - 270885 (-)
Gene ID: HRGMv2_2499_3_248
Type: TC
Location: 270904 - 272154 (-)
Gene ID: HRGMv2_2499_3_249
Type: CAZyme
Location: 272189 - 274351 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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