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Cluster: HRGMv2_2499_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2499_1 HRGMv2_2499_1_791 820969 822489 - GT4
TC HRGMv2_2499_1 HRGMv2_2499_1_792 822502 824874 - 3.A.5.10.1
pfam HRGMv2_2499_1 HRGMv2_2499_1_793 824867 825307 - Sec-ASP3
TC HRGMv2_2499_1 HRGMv2_2499_1_794 825304 826833 - 3.A.5.10.1
TC HRGMv2_2499_1 HRGMv2_2499_1_795 826817 828397 - 3.A.5.10.1
TC HRGMv2_2499_1 HRGMv2_2499_1_796 828407 829624 - 3.A.5.10.1
CAZyme HRGMv2_2499_1 HRGMv2_2499_1_797 829710 830939 - GT8
CAZyme HRGMv2_2499_1 HRGMv2_2499_1_798 830955 832181 - GT8
Gene ID: HRGMv2_2499_1_791
Type: CAZyme
Location: 820969 - 822489 (-)
Gene ID: HRGMv2_2499_1_792
Type: TC
Location: 822502 - 824874 (-)
Gene ID: HRGMv2_2499_1_793
Type: pfam
Location: 824867 - 825307 (-)
Gene ID: HRGMv2_2499_1_794
Type: TC
Location: 825304 - 826833 (-)
Gene ID: HRGMv2_2499_1_795
Type: TC
Location: 826817 - 828397 (-)
Gene ID: HRGMv2_2499_1_796
Type: TC
Location: 828407 - 829624 (-)
Gene ID: HRGMv2_2499_1_797
Type: CAZyme
Location: 829710 - 830939 (-)
Gene ID: HRGMv2_2499_1_798
Type: CAZyme
Location: 830955 - 832181 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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