dbCAN Logo

Cluster: HRGMv2_2499_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2499_2 HRGMv2_2499_2_244 265351 266274 - 3.A.1.1.29
TC HRGMv2_2499_2 HRGMv2_2499_2_245 266288 267217 - 3.A.1.1.10
CAZyme HRGMv2_2499_2 HRGMv2_2499_2_246 267575 269455 - GH20
pfam HRGMv2_2499_2 HRGMv2_2499_2_247 269449 270318 - ROK
CAZyme HRGMv2_2499_2 HRGMv2_2499_2_248 270415 273060 - GH38
CAZyme HRGMv2_2499_2 HRGMv2_2499_2_249 273115 274395 - GH125
CAZyme HRGMv2_2499_2 HRGMv2_2499_2_250 274566 276236 + GH92
TC HRGMv2_2499_2 HRGMv2_2499_2_251 277417 278922 - 3.A.1.15.3
TC HRGMv2_2499_2 HRGMv2_2499_2_252 278932 279738 - 3.A.1.15.3
TC HRGMv2_2499_2 HRGMv2_2499_2_253 279731 280435 - 3.A.1.15.3
Gene ID: HRGMv2_2499_2_244
Type: TC
Location: 265351 - 266274 (-)
Gene ID: HRGMv2_2499_2_245
Type: TC
Location: 266288 - 267217 (-)
Gene ID: HRGMv2_2499_2_246
Type: CAZyme
Location: 267575 - 269455 (-)
Gene ID: HRGMv2_2499_2_247
Type: pfam
Location: 269449 - 270318 (-)
Gene ID: HRGMv2_2499_2_248
Type: CAZyme
Location: 270415 - 273060 (-)
Gene ID: HRGMv2_2499_2_249
Type: CAZyme
Location: 273115 - 274395 (-)
Gene ID: HRGMv2_2499_2_250
Type: CAZyme
Location: 274566 - 276236 (+)
Gene ID: HRGMv2_2499_2_251
Type: TC
Location: 277417 - 278922 (-)
Gene ID: HRGMv2_2499_2_252
Type: TC
Location: 278932 - 279738 (-)
Gene ID: HRGMv2_2499_2_253
Type: TC
Location: 279731 - 280435 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List