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Cluster: HRGMv2_2499_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2499_1 HRGMv2_2499_1_691 718388 719167 - CE1
pfam HRGMv2_2499_1 HRGMv2_2499_1_692 719236 720897 - Lactamase_B | RMMBL | Lactamase_B_2 | RNase_J_C | RNase_J_b_CASP
CAZyme HRGMv2_2499_1 HRGMv2_2499_1_693 721408 722055 - CBM50
pfam HRGMv2_2499_1 HRGMv2_2499_1_694 722223 724499 - DHH | DHHA1 | ssDNA-exonuc_C | RecJ_OB
TC HRGMv2_2499_1 HRGMv2_2499_1_695 724620 725378 + 3.A.1.3.9
TC HRGMv2_2499_1 HRGMv2_2499_1_696 725389 726183 + 3.A.1.3.16
TC HRGMv2_2499_1 HRGMv2_2499_1_697 726196 726873 + 3.A.1.3.16
TC HRGMv2_2499_1 HRGMv2_2499_1_698 726883 727542 + 3.A.1.3.18
Gene ID: HRGMv2_2499_1_691
Type: CAZyme
Location: 718388 - 719167 (-)
Gene ID: HRGMv2_2499_1_692
Type: pfam
Location: 719236 - 720897 (-)
Gene ID: HRGMv2_2499_1_693
Type: CAZyme
Location: 721408 - 722055 (-)
Gene ID: HRGMv2_2499_1_694
Type: pfam
Location: 722223 - 724499 (-)
Gene ID: HRGMv2_2499_1_695
Type: TC
Location: 724620 - 725378 (+)
Gene ID: HRGMv2_2499_1_696
Type: TC
Location: 725389 - 726183 (+)
Gene ID: HRGMv2_2499_1_697
Type: TC
Location: 726196 - 726873 (+)
Gene ID: HRGMv2_2499_1_698
Type: TC
Location: 726883 - 727542 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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