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Cluster: HRGMv2_2499_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2499_2 HRGMv2_2499_2_8 20310 21362 - GT113
STP HRGMv2_2499_2 HRGMv2_2499_2_9 21390 22493 - Pyr_redox
TC HRGMv2_2499_2 HRGMv2_2499_2_10 22503 23915 - 2.A.66.2.16
NULL(UNKNOWN) HRGMv2_2499_2 HRGMv2_2499_2_11 23912 25072 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2499_2 HRGMv2_2499_2_12 25111 26076 - GT2
pfam HRGMv2_2499_2 HRGMv2_2499_2_13 26111 27109 - Stealth_CR2 | Stealth_CR1 | Stealth_CR3
CAZyme HRGMv2_2499_2 HRGMv2_2499_2_14 27112 28269 - GT4
CAZyme HRGMv2_2499_2 HRGMv2_2499_2_15 28273 29445 - GT4
TC HRGMv2_2499_2 HRGMv2_2499_2_16 29476 30843 - 9.B.18.1.2
TC HRGMv2_2499_2 HRGMv2_2499_2_17 30866 31558 - 8.A.3.2.2
TC HRGMv2_2499_2 HRGMv2_2499_2_18 31568 32260 - 8.A.3.2.3
pfam HRGMv2_2499_2 HRGMv2_2499_2_19 32269 33000 - CpsB_CapC
pfam HRGMv2_2499_2 HRGMv2_2499_2_20 33002 34447 - DNA_PPF | LytR_cpsA_psr
TC HRGMv2_2499_2 HRGMv2_2499_2_21 34639 36600 - 3.A.1.5.19
TC HRGMv2_2499_2 HRGMv2_2499_2_22 36748 38715 - 3.A.1.5.25
CAZyme HRGMv2_2499_2 HRGMv2_2499_2_23 38885 40495 - GH13_31
Gene ID: HRGMv2_2499_2_8
Type: CAZyme
Location: 20310 - 21362 (-)
Gene ID: HRGMv2_2499_2_9
Type: STP
Location: 21390 - 22493 (-)
Gene ID: HRGMv2_2499_2_10
Type: TC
Location: 22503 - 23915 (-)
Gene ID: HRGMv2_2499_2_11
Type:
Location: 23912 - 25072 (-)
Gene ID: HRGMv2_2499_2_12
Type: CAZyme
Location: 25111 - 26076 (-)
Gene ID: HRGMv2_2499_2_13
Type: pfam
Location: 26111 - 27109 (-)
Gene ID: HRGMv2_2499_2_14
Type: CAZyme
Location: 27112 - 28269 (-)
Gene ID: HRGMv2_2499_2_15
Type: CAZyme
Location: 28273 - 29445 (-)
Gene ID: HRGMv2_2499_2_16
Type: TC
Location: 29476 - 30843 (-)
Gene ID: HRGMv2_2499_2_17
Type: TC
Location: 30866 - 31558 (-)
Gene ID: HRGMv2_2499_2_18
Type: TC
Location: 31568 - 32260 (-)
Gene ID: HRGMv2_2499_2_19
Type: pfam
Location: 32269 - 33000 (-)
Gene ID: HRGMv2_2499_2_20
Type: pfam
Location: 33002 - 34447 (-)
Gene ID: HRGMv2_2499_2_21
Type: TC
Location: 34639 - 36600 (-)
Gene ID: HRGMv2_2499_2_22
Type: TC
Location: 36748 - 38715 (-)
Gene ID: HRGMv2_2499_2_23
Type: CAZyme
Location: 38885 - 40495 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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