Cluster: HRGMv2_2499_CGC6
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2499
- CGC Family ID: CGCFAM_02151
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2499_1 | HRGMv2_2499_1_607 | 627371 | 628711 | + | 2.A.22.5.3 |
| pfam | HRGMv2_2499_1 | HRGMv2_2499_1_608 | 628753 | 629697 | - | PMI_typeI_C | PMI_typeI_cat | MPI_cupin_dom |
| CAZyme | HRGMv2_2499_1 | HRGMv2_2499_1_609 | 629817 | 631256 | - | GH1 |
Gene ID: HRGMv2_2499_1_607
Type: TC
Location: 627371 - 628711 (+)
Type: TC
Location: 627371 - 628711 (+)
Gene ID: HRGMv2_2499_1_608
Type: pfam
Location: 628753 - 629697 (-)
Type: pfam
Location: 628753 - 629697 (-)
Gene ID: HRGMv2_2499_1_609
Type: CAZyme
Location: 629817 - 631256 (-)
Type: CAZyme
Location: 629817 - 631256 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus oralis_BY
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.