Genome Details
Selected Rep_genome_ID: HRGMv2_2460
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_2460 | 2,077,447 | 98.75% | 0.374% | Malaysia | Asia | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2460_CGC13 | CGCFAM_00003 | Yes | 9 | 5 | |
| HRGMv2_2460_CGC9 | CGCFAM_00004 | Yes | 7 | 4 | alpha-glucan |
| HRGMv2_2460_CGC21 | CGCFAM_00215 | Yes | 6 | 1 | alpha-glucan |
| HRGMv2_2460_CGC28 | CGCFAM_02157 | Yes | 7 | 1 | |
| HRGMv2_2460_CGC18 | CGCFAM_02714 | Yes | 5 | 1 | |
| HRGMv2_2460_CGC7 | CGCFAM_04974 | Yes | 7 | 4 | |
| HRGMv2_2460_CGC29 | CGCFAM_05555 | Yes | 4 | 1 | |
| HRGMv2_2460_CGC4 | CGCFAM_06128 | Yes | 10 | 1 | |
| HRGMv2_2460_CGC19 | CGCFAM_06129 | Yes | 11 | 1 | |
| HRGMv2_2460_CGC5 | CGCFAM_06130 | Yes | 12 | 3 | |
| HRGMv2_2460_CGC20 | CGCFAM_10093 | Yes | 7 | 1 | |
| HRGMv2_2460_CGC3 | CGCFAM_10094 | Yes | 5 | 4 |
Top CAZyme Families