Cluster: HRGMv2_2460_CGC9
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate: alpha-glucan
- Genome ID: HRGMv2_2460
- CGC Family ID: CGCFAM_00004
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2460_16 | HRGMv2_2460_16_9 | 16006 | 18411 | - | GT35 |
| CAZyme | HRGMv2_2460_16 | HRGMv2_2460_16_10 | 18741 | 20171 | - | GT5 |
| pfam | HRGMv2_2460_16 | HRGMv2_2460_16_11 | 20168 | 21304 | - | NTP_transferase | Hexapep_GlmU |
| pfam | HRGMv2_2460_16 | HRGMv2_2460_16_12 | 21294 | 22436 | - | NTP_transferase | NTP_transf_3 | Hexapep_GlmU |
| CAZyme | HRGMv2_2460_16 | HRGMv2_2460_16_13 | 22627 | 24507 | - | CBM48 | GH13_9 |
| CAZyme | HRGMv2_2460_16 | HRGMv2_2460_16_14 | 24678 | 26873 | - | CBM41 | GH13_14 |
| TC | HRGMv2_2460_16 | HRGMv2_2460_16_15 | 27083 | 29497 | - | 3.A.12.1.1 |
Gene ID: HRGMv2_2460_16_9
Type: CAZyme
Location: 16006 - 18411 (-)
Type: CAZyme
Location: 16006 - 18411 (-)
Gene ID: HRGMv2_2460_16_10
Type: CAZyme
Location: 18741 - 20171 (-)
Type: CAZyme
Location: 18741 - 20171 (-)
Gene ID: HRGMv2_2460_16_11
Type: pfam
Location: 20168 - 21304 (-)
Type: pfam
Location: 20168 - 21304 (-)
Gene ID: HRGMv2_2460_16_12
Type: pfam
Location: 21294 - 22436 (-)
Type: pfam
Location: 21294 - 22436 (-)
Gene ID: HRGMv2_2460_16_13
Type: CAZyme
Location: 22627 - 24507 (-)
Type: CAZyme
Location: 22627 - 24507 (-)
Gene ID: HRGMv2_2460_16_14
Type: CAZyme
Location: 24678 - 26873 (-)
Type: CAZyme
Location: 24678 - 26873 (-)
Gene ID: HRGMv2_2460_16_15
Type: TC
Location: 27083 - 29497 (-)
Type: TC
Location: 27083 - 29497 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.