Cluster: HRGMv2_2460_CGC29
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2460
- CGC Family ID: CGCFAM_05555
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2460_78 | HRGMv2_2460_78_3 | 1067 | 2353 | - | CBM50 |
| pfam | HRGMv2_2460_78 | HRGMv2_2460_78_4 | 2581 | 4071 | + | tRNA-synt_2 | tRNA_anti-codon | tRNA-synt_2d |
| NULL(UNKNOWN) | HRGMv2_2460_78 | HRGMv2_2460_78_5 | 4657 | 5535 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2460_78 | HRGMv2_2460_78_6 | 5843 | 7177 | + | 2.A.55.2.6 |
Gene ID: HRGMv2_2460_78_3
Type: CAZyme
Location: 1067 - 2353 (-)
Type: CAZyme
Location: 1067 - 2353 (-)
Gene ID: HRGMv2_2460_78_4
Type: pfam
Location: 2581 - 4071 (+)
Type: pfam
Location: 2581 - 4071 (+)
Gene ID: HRGMv2_2460_78_5
Type:
Location: 4657 - 5535 (+)
Type:
Location: 4657 - 5535 (+)
Gene ID: HRGMv2_2460_78_6
Type: TC
Location: 5843 - 7177 (+)
Type: TC
Location: 5843 - 7177 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2460_78_4 | vegetarian > vegan | 1.25176 | 0.03430 |