Genome Details
Selected Rep_genome_ID: HRGMv2_1797
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Species
Citrobacter europaeus
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_1797 | 5,313,760 | 100% | 0.26% | UK | Europe | HRGM |
| Rep_968 | 5,011,231 | 99.814% | 0.808306% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_1797_CGC47 | CGCFAM_00433 | Yes | 7 | 1 | |
| HRGMv2_1797_CGC46 | CGCFAM_00435 | Yes | 15 | 1 | |
| HRGMv2_1797_CGC23 | CGCFAM_00796 | Yes | 6 | 1 | |
| HRGMv2_1797_CGC5 | CGCFAM_01371 | Yes | 7 | 2 | |
| HRGMv2_1797_CGC59 | CGCFAM_01760 | Yes | 5 | 1 | |
| HRGMv2_1797_CGC19 | CGCFAM_02025 | Yes | 6 | 1 | |
| HRGMv2_1797_CGC39 | CGCFAM_02793 | Yes | 11 | 1 | |
| HRGMv2_1797_CGC48 | CGCFAM_03297 | Yes | 20 | 3 | |
| HRGMv2_1797_CGC33 | CGCFAM_03309 | Yes | 5 | 1 | |
| HRGMv2_1797_CGC12 | CGCFAM_04159 | Yes | 6 | 2 | galactan |
| HRGMv2_1797_CGC27 | CGCFAM_04724 | Yes | 5 | 2 | |
| HRGMv2_1797_CGC24 | CGCFAM_04914 | Yes | 8 | 1 | |
| HRGMv2_1797_CGC36 | CGCFAM_05507 | Yes | 4 | 1 | |
| HRGMv2_1797_CGC53 | CGCFAM_06064 | Yes | 22 | 1 |
Top CAZyme Families