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Cluster: HRGMv2_1797_CGC46

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1797_8 HRGMv2_1797_8_187 211304 213844 + GT51
pfam HRGMv2_1797_8 HRGMv2_1797_8_188 214506 215048 + Fimbrial
pfam HRGMv2_1797_8 HRGMv2_1797_8_189 215100 215813 + PapD_N | PapD_C
TC HRGMv2_1797_8 HRGMv2_1797_8_190 215845 218328 + 1.B.11.3.6
pfam HRGMv2_1797_8 HRGMv2_1797_8_191 218343 219338 + Fimbrial
pfam HRGMv2_1797_8 HRGMv2_1797_8_192 219392 220393 + Fimbrial | MrkDrd
TC HRGMv2_1797_8 HRGMv2_1797_8_193 220616 222874 + 1.B.14.1.2
TC HRGMv2_1797_8 HRGMv2_1797_8_194 222922 223719 + 3.A.1.14.3
TC HRGMv2_1797_8 HRGMv2_1797_8_195 223719 224609 + 3.A.1.14.3
TC HRGMv2_1797_8 HRGMv2_1797_8_196 224606 226588 + 3.A.1.14.3
pfam HRGMv2_1797_8 HRGMv2_1797_8_197 226703 227983 - Aminotran_3
TC HRGMv2_1797_8 HRGMv2_1797_8_198 228152 229573 + 2.A.49.5.5
pfam HRGMv2_1797_8 HRGMv2_1797_8_199 229655 229999 + Fe-S_biosyn
TC HRGMv2_1797_8 HRGMv2_1797_8_200 230119 230742 - 1.A.62.2.2
TC HRGMv2_1797_8 HRGMv2_1797_8_201 230780 231580 - 3.A.1.13.1
Gene ID: HRGMv2_1797_8_187
Type: CAZyme
Location: 211304 - 213844 (+)
Gene ID: HRGMv2_1797_8_188
Type: pfam
Location: 214506 - 215048 (+)
Gene ID: HRGMv2_1797_8_189
Type: pfam
Location: 215100 - 215813 (+)
Gene ID: HRGMv2_1797_8_190
Type: TC
Location: 215845 - 218328 (+)
Gene ID: HRGMv2_1797_8_191
Type: pfam
Location: 218343 - 219338 (+)
Gene ID: HRGMv2_1797_8_192
Type: pfam
Location: 219392 - 220393 (+)
Gene ID: HRGMv2_1797_8_193
Type: TC
Location: 220616 - 222874 (+)
Gene ID: HRGMv2_1797_8_194
Type: TC
Location: 222922 - 223719 (+)
Gene ID: HRGMv2_1797_8_195
Type: TC
Location: 223719 - 224609 (+)
Gene ID: HRGMv2_1797_8_196
Type: TC
Location: 224606 - 226588 (+)
Gene ID: HRGMv2_1797_8_197
Type: pfam
Location: 226703 - 227983 (-)
Gene ID: HRGMv2_1797_8_198
Type: TC
Location: 228152 - 229573 (+)
Gene ID: HRGMv2_1797_8_199
Type: pfam
Location: 229655 - 229999 (+)
Gene ID: HRGMv2_1797_8_200
Type: TC
Location: 230119 - 230742 (-)
Gene ID: HRGMv2_1797_8_201
Type: TC
Location: 230780 - 231580 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1797_8_198 vegetarian > vegan 1.49712 0.02553

🧭 Explore Read Mapping of CGC

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