Cluster: HRGMv2_1797_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1797
- CGC Family ID: CGCFAM_02025
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1797_3 | HRGMv2_1797_3_332 | 361879 | 364167 | + | 3.D.1.9.2 |
| peptidase | HRGMv2_1797_3 | HRGMv2_1797_3_333 | 364321 | 366180 | + | C51.A01 |
| TC | HRGMv2_1797_3 | HRGMv2_1797_3_334 | 366471 | 367178 | - | 9.B.120.1.1 |
| pfam | HRGMv2_1797_3 | HRGMv2_1797_3_335 | 367647 | 369782 | + | OKR_DC_1 | OKR_DC_1_N | OKR_DC_1_C |
| TC | HRGMv2_1797_3 | HRGMv2_1797_3_336 | 369874 | 371130 | - | 2.A.1.10.1 |
| CAZyme | HRGMv2_1797_3 | HRGMv2_1797_3_337 | 371341 | 372426 | - | GH23 |
Gene ID: HRGMv2_1797_3_332
Type: TC
Location: 361879 - 364167 (+)
Type: TC
Location: 361879 - 364167 (+)
Gene ID: HRGMv2_1797_3_333
Type: peptidase
Location: 364321 - 366180 (+)
Type: peptidase
Location: 364321 - 366180 (+)
Gene ID: HRGMv2_1797_3_334
Type: TC
Location: 366471 - 367178 (-)
Type: TC
Location: 366471 - 367178 (-)
Gene ID: HRGMv2_1797_3_335
Type: pfam
Location: 367647 - 369782 (+)
Type: pfam
Location: 367647 - 369782 (+)
Gene ID: HRGMv2_1797_3_336
Type: TC
Location: 369874 - 371130 (-)
Type: TC
Location: 369874 - 371130 (-)
Gene ID: HRGMv2_1797_3_337
Type: CAZyme
Location: 371341 - 372426 (-)
Type: CAZyme
Location: 371341 - 372426 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Species
Citrobacter europaeus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.