Genome Details
Selected Rep_genome_ID: HRGMv2_0730
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Pumilibacteraceae
Genus
Protoclostridium
Species
Protoclostridium gallicola
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_0730 | 1,799,351 | 91.26% | 0.931% | UK | Europe | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0730_CGC13 | CGCFAM_00051 | Yes | 4 | 2 | |
| HRGMv2_0730_CGC5 | CGCFAM_00200 | Yes | 8 | 3 | |
| HRGMv2_0730_CGC15 | CGCFAM_01736 | Yes | 8 | 1 | |
| HRGMv2_0730_CGC7 | CGCFAM_01947 | Yes | 10 | 4 | |
| HRGMv2_0730_CGC4 | CGCFAM_02586 | Yes | 5 | 1 | |
| HRGMv2_0730_CGC1 | CGCFAM_06029 | Yes | 5 | 2 | |
| HRGMv2_0730_CGC12 | CGCFAM_09199 | Yes | 6 | 2 |
Top CAZyme Families