Cluster: HRGMv2_0730_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0730
- CGC Family ID: CGCFAM_00051
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0730_54 | HRGMv2_0730_54_1 | 1 | 1719 | + | GH3 |
| pfam | HRGMv2_0730_54 | HRGMv2_0730_54_2 | 1818 | 3356 | + | He_PIG | He_PIG | He_PIG |
| CAZyme | HRGMv2_0730_54 | HRGMv2_0730_54_3 | 3366 | 6317 | + | GH3 |
| TC | HRGMv2_0730_54 | HRGMv2_0730_54_4 | 6509 | 7471 | + | 8.A.5.1.6 |
Gene ID: HRGMv2_0730_54_1
Type: CAZyme
Location: 1 - 1719 (+)
Type: CAZyme
Location: 1 - 1719 (+)
Gene ID: HRGMv2_0730_54_2
Type: pfam
Location: 1818 - 3356 (+)
Type: pfam
Location: 1818 - 3356 (+)
Gene ID: HRGMv2_0730_54_3
Type: CAZyme
Location: 3366 - 6317 (+)
Type: CAZyme
Location: 3366 - 6317 (+)
Gene ID: HRGMv2_0730_54_4
Type: TC
Location: 6509 - 7471 (+)
Type: TC
Location: 6509 - 7471 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Pumilibacteraceae
Genus
Protoclostridium
Species
Protoclostridium gallicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.