Cluster: HRGMv2_0730_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0730
- CGC Family ID: CGCFAM_06029
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0730_2 | HRGMv2_0730_2_31 | 30678 | 31832 | + | 2.A.45.2.6 |
| TC | HRGMv2_0730_2 | HRGMv2_0730_2_32 | 31834 | 33300 | - | 3.A.1.120.5 |
| CAZyme | HRGMv2_0730_2 | HRGMv2_0730_2_33 | 34056 | 37838 | + | GH3 |
| pfam | HRGMv2_0730_2 | HRGMv2_0730_2_34 | 37959 | 39428 | + | Big_3 | Flg_new | Flg_new |
| CAZyme | HRGMv2_0730_2 | HRGMv2_0730_2_35 | 39493 | 42465 | + | GH3 |
Gene ID: HRGMv2_0730_2_31
Type: TC
Location: 30678 - 31832 (+)
Type: TC
Location: 30678 - 31832 (+)
Gene ID: HRGMv2_0730_2_32
Type: TC
Location: 31834 - 33300 (-)
Type: TC
Location: 31834 - 33300 (-)
Gene ID: HRGMv2_0730_2_33
Type: CAZyme
Location: 34056 - 37838 (+)
Type: CAZyme
Location: 34056 - 37838 (+)
Gene ID: HRGMv2_0730_2_34
Type: pfam
Location: 37959 - 39428 (+)
Type: pfam
Location: 37959 - 39428 (+)
Gene ID: HRGMv2_0730_2_35
Type: CAZyme
Location: 39493 - 42465 (+)
Type: CAZyme
Location: 39493 - 42465 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Pumilibacteraceae
Genus
Protoclostridium
Species
Protoclostridium gallicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.